Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
UBE2I

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
prolif_Ubc9_ChIPSeq
cell line
WI38
cell type
primary fibroblasts
status
Proliferative
genotype/variation
infected with pBABE-puro-empty
chip antibodies
(BD transduction)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
36478620
Reads aligned (%)
47.2
Duplicates removed (%)
26.6
Number of peaks
1706 (qval < 1E-05)

hg38

Number of total reads
36478620
Reads aligned (%)
48.3
Duplicates removed (%)
25.4
Number of peaks
1682 (qval < 1E-05)

Base call quality data from DBCLS SRA