Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SUMO1

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
prolif_SUMO1_ChIPSeq
cell line
WI38
cell type
primary fibroblasts
status
Proliferative
genotype/variation
infected with pBABE-puro-empty
chip antibodies
SUMO1 (non-commercial)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
147994386
Reads aligned (%)
47.2
Duplicates removed (%)
43.0
Number of peaks
18291 (qval < 1E-05)

hg38

Number of total reads
147994386
Reads aligned (%)
49.0
Duplicates removed (%)
41.3
Number of peaks
18334 (qval < 1E-05)

Base call quality data from DBCLS SRA