SRX204162
GSM1035424: prolif SUMO1 rep1 ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SUMO1

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
prolif_SUMO1_ChIPSeq
cell line
WI38
cell type
primary fibroblasts
status
Proliferative
genotype/variation
infected with pBABE-puro-empty
chip antibodies
SUMO1 (non-commercial)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
35109455
Reads aligned (%)
44.7
Duplicates removed (%)
51.4
Number of peaks
3752 (qval < 1E-05)

hg38

Number of total reads
35109455
Reads aligned (%)
46.8
Duplicates removed (%)
49.5
Number of peaks
3756 (qval < 1E-05)

Base call quality data from DBCLS SRA