SRX203208
GSM1032638: MK5D NFE2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Nfe2

Cell type

Cell type Class
Blood
Cell type
Megakaryocytes
MeSH Description
Very large BONE MARROW CELLS which release mature BLOOD PLATELETS.

Attributes by original data submitter

Sample

source_name
Mature Megakaryocytes
strain
CD1
age
E15
tissue
liver
cell type
Mature Megakaryocytes
genome/variation
wild-type
antibody
NF-E2 TB16+TB17, home made

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34821585
Reads aligned (%)
94.0
Duplicates removed (%)
10.5
Number of peaks
2993 (qval < 1E-05)

mm9

Number of total reads
34821585
Reads aligned (%)
93.8
Duplicates removed (%)
10.6
Number of peaks
3011 (qval < 1E-05)

Base call quality data from DBCLS SRA