SRX203058
GSM1031241: ChiP-Seq REST APL blast; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Acute promyelocytic leukemia
NA
NA

Attributes by original data submitter

Sample

source_name
APL bone marrow blasts
disease state
Primary diagnosis
Sex
male
age
45

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
171763074
Reads aligned (%)
91.3
Duplicates removed (%)
66.5
Number of peaks
6161 (qval < 1E-05)

hg19

Number of total reads
171763074
Reads aligned (%)
90.4
Duplicates removed (%)
68.5
Number of peaks
5642 (qval < 1E-05)

Base call quality data from DBCLS SRA