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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: fs(1)h
wikigenes
PDBj
CellType: Kc167
ATCC
MeSH
RIKEN BRC
SRX202999
GSM1032228: Fs1h L Kc ChIPseq; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
fs(1)h
Cell type
Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage
Attributes by original data submitter
Sample
source_name
Female late embryo-derived cell line, ChIP of Fs(1)h long isoform
cell line
Kc167
cell type
female late embryo-derived cell line
chip antibody
rabbit polyclonal antibody specific to Fs(1)h long isoform
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
75492468
Reads aligned (%)
54.3
Duplicates removed (%)
49.3
Number of peaks
8971 (qval < 1E-05)
dm3
Number of total reads
75492468
Reads aligned (%)
54.7
Duplicates removed (%)
46.4
Number of peaks
9198 (qval < 1E-05)
Base call quality data from
DBCLS SRA