Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

GEO Accession
GSM1032197
strain
C57BL/6
cell type
Embryonic stem cells (ES3)
time-point
KO: 4 days post 4-OHT inducible CRE
chip antibody
None (Total Input)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
28565610
Reads aligned (%)
91.1
Duplicates removed (%)
53.9
Number of peaks
547 (qval < 1E-05)

mm9

Number of total reads
28565610
Reads aligned (%)
90.8
Duplicates removed (%)
54.0
Number of peaks
603 (qval < 1E-05)

Base call quality data from DBCLS SRA