SRX202991
GSM1032192: H3K27ac ChIP: KAP1 WT TI; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

GEO Accession
GSM1032192
strain
C57BL/6
cell type
Embryonic stem cells (ES3)
time-point
4 days post puromycin selection of empty shRNA vector
chip antibody
None (Total Input)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
42392702
Reads aligned (%)
66.5
Duplicates removed (%)
20.3
Number of peaks
384 (qval < 1E-05)

mm9

Number of total reads
42392702
Reads aligned (%)
66.4
Duplicates removed (%)
20.3
Number of peaks
322 (qval < 1E-05)

Base call quality data from DBCLS SRA