Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryonic fibroblast
Cell type
C3H/10T1/2
NA
NA

Attributes by original data submitter

Sample

source_name
C3H10T1/2 mouse cells
cell type
C3H10T1/2 cells
chip antibody
IgG (in-house)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
219354086
Reads aligned (%)
54.4
Duplicates removed (%)
40.3
Number of peaks
3329 (qval < 1E-05)

mm9

Number of total reads
219354086
Reads aligned (%)
54.3
Duplicates removed (%)
40.4
Number of peaks
3436 (qval < 1E-05)

Base call quality data from DBCLS SRA