Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
su(Hw)

Cell type

Cell type Class
Cell line
Cell type
S3
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S3 cells
chip antibody
Su(Hw)
cell type
S3 late embryonic cells
qualscores
phred64

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
14712177
Reads aligned (%)
18.0
Duplicates removed (%)
57.4
Number of peaks
4050 (qval < 1E-05)

dm6

Number of total reads
14712177
Reads aligned (%)
17.5
Duplicates removed (%)
58.4
Number of peaks
4362 (qval < 1E-05)

Base call quality data from DBCLS SRA