Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rrp40

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
chip antibody
Rrp40
cell type
S2 late embryonic cells
qualscores
phred33

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
117313971
Reads aligned (%)
7.7
Duplicates removed (%)
81.8
Number of peaks
13416 (qval < 1E-05)

dm6

Number of total reads
117313971
Reads aligned (%)
6.4
Duplicates removed (%)
84.7
Number of peaks
9970 (qval < 1E-05)

Base call quality data from DBCLS SRA