Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rrp40

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
chip antibody
Rrp40
cell type
S2 late embryonic cells
qualscores
phred64

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
10881660
Reads aligned (%)
42.7
Duplicates removed (%)
36.0
Number of peaks
4602 (qval < 1E-05)

dm6

Number of total reads
10881660
Reads aligned (%)
42.4
Duplicates removed (%)
38.1
Number of peaks
4372 (qval < 1E-05)

Base call quality data from DBCLS SRA