Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cebpb

Cell type

Cell type Class
Bone
Cell type
MC3T3-E1
NA
NA

Attributes by original data submitter

Sample

source_name
MC3T3-E1 cells differentiated for 15 days
passage number
5 - 12
antibody
C/EBPβ (Santa Cruz, C-19, sc-150, lot# F3011)
cell line
MC3T3-E1 differentiated for 15 days
treatment
ethanol vehicle

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
193886452
Reads aligned (%)
94.3
Duplicates removed (%)
68.7
Number of peaks
70490 (qval < 1E-05)

mm9

Number of total reads
193886452
Reads aligned (%)
93.9
Duplicates removed (%)
68.7
Number of peaks
70597 (qval < 1E-05)

Base call quality data from DBCLS SRA