SRX201893
GSM1027421: DNA input from Piwi-KD rep2; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
OSC
Tissue Source
ovary
Developmental Stage
adult stage

Attributes by original data submitter

Sample

source_name
DNA input_Piwi-KD
genotype/variation
RNAi piwi
Stage
96h after transfection
tissue/cell type
Ovarian Somatic Cells (OSC)
molecule subtype
total DNA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
34832442
Reads aligned (%)
96.3
Duplicates removed (%)
34.4
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
34832442
Reads aligned (%)
97.2
Duplicates removed (%)
31.9
Number of peaks
2927 (qval < 1E-05)

Base call quality data from DBCLS SRA