Toggle navigation
Peak Browser
Enrichment Analysis
Diff Analysis
Target Genes
Colocalization
Publications
Docs
Search
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K9me3
wikigenes
PDBj
CellType: OSC
ATCC
MeSH
RIKEN BRC
SRX201884
GSM1027412: H3K9m3 ChIP-seq from Piwi-KD rep1; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K9me3
Cell type
Cell type Class
Cell line
Cell type
OSC
Tissue Source
ovary
Developmental Stage
adult stage
Attributes by original data submitter
Sample
source_name
H3K9m3 ChIP-seq_Piwi-KD
genotype/variation
RNAi piwi
Stage
96h after transfection
tissue/cell type
Ovarian Somatic Cells (OSC)
molecule subtype
H3K9m3-bound DNA
chip antibody
antiH3K9me3
chip antibody vendor
abcam
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
32593052
Reads aligned (%)
95.8
Duplicates removed (%)
38.5
Number of peaks
11036 (qval < 1E-05)
dm3
Number of total reads
32593052
Reads aligned (%)
97.5
Duplicates removed (%)
30.9
Number of peaks
19730 (qval < 1E-05)
Base call quality data from
DBCLS SRA