SRX201883
GSM1027411: H3K9m3 ChIP-seq from Mael-KD rep1; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Cell line
Cell type
OSC
Tissue Source
ovary
Developmental Stage
adult stage

Attributes by original data submitter

Sample

source_name
H3K9m3 ChIP-seq_Mael-KD
genotype/variation
RNAi mael
Stage
96h after transfection
tissue/cell type
Ovarian Somatic Cells (OSC)
molecule subtype
H3K9m3-bound DNA
chip antibody
antiH3K9me3
chip antibody vendor
abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
46632369
Reads aligned (%)
96.2
Duplicates removed (%)
51.7
Number of peaks
14666 (qval < 1E-05)

dm3

Number of total reads
46632369
Reads aligned (%)
97.7
Duplicates removed (%)
44.4
Number of peaks
24484 (qval < 1E-05)

Base call quality data from DBCLS SRA