Curated Sample Data


Genome
dm3
Antigen Class
Histone
Antigen
H3K27ac
Cell type Class
Cell line
Cell type
S2

Cell type information


Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by Original Data Submitter


source_name
Drosophila S2 cells
cell line
S2
treatment
untreated
chip antibody
H3K27ac (Abcam, ab4729)

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Pol II ChIP material was prepared as described previously (Muse et al., 2007). Immunoprecipitated material was purified using the Qiaquick PCR purification kit

Platform Information


instrument_model
NextSeq 500

External Database Query

Logs in read processing pipeline


Number of total reads
94859149
Reads aligned (%)
96.3
Duplicates removed (%)
42.4
Number of peaks
7385 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA