Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
LMNA

Cell type

Cell type Class
Epidermis
Cell type
Forearm skin
NA
NA

Attributes by original data submitter

Sample

source_name
normal forearm skin biopsy, lamin ChIP
disease status
normal
tissue
forearm skin biopsy
cell type
fibroblasts
gender
male
cell line
HGFDFN168
passage
16
chip antibody
goat anti-lamin A/C N18
antibody vendor
Santa Cruz
antibody catalog number
sc-6215

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
44127069
Reads aligned (%)
67.6
Duplicates removed (%)
26.6
Number of peaks
1648 (qval < 1E-05)

hg38

Number of total reads
44127069
Reads aligned (%)
70.0
Duplicates removed (%)
24.8
Number of peaks
1594 (qval < 1E-05)

Base call quality data from DBCLS SRA