SRX200041
GSM1023615: H3K27me3 ChIP, Age Control, p17, INPUT; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Epidermis
Cell type
AG08470
NA
NA

Attributes by original data submitter

Sample

source_name
normal skin biopsy, input
disease status
normal
tissue
skin biopsy
cell type
fibroblasts
gender
female
cell line
AG08470
passage
17
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40822683
Reads aligned (%)
97.2
Duplicates removed (%)
2.8
Number of peaks
892 (qval < 1E-05)

hg19

Number of total reads
40822683
Reads aligned (%)
96.5
Duplicates removed (%)
4.2
Number of peaks
1302 (qval < 1E-05)

Base call quality data from DBCLS SRA