Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblast
NA
NA

Attributes by original data submitter

Sample

source_name
normal forearm skin biopsy, input
disease status
normal
tissue
forearm skin biopsy
cell type
fibroblasts
gender
male
cell line
HGFDFN168
passage
19
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
34555267
Reads aligned (%)
97.5
Duplicates removed (%)
2.7
Number of peaks
995 (qval < 1E-05)

hg19

Number of total reads
34555267
Reads aligned (%)
96.7
Duplicates removed (%)
4.1
Number of peaks
1260 (qval < 1E-05)

Base call quality data from DBCLS SRA