Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K8ac

Cell type

Cell type Class
Breast
Cell type
76NF2V
NA
NA

Attributes by original data submitter

Sample

source_name
76NF2V cells, H4K8ac ChIP
cell line
76NF2V
cell type
Breast cancer cell line
treatment
Control
chip antibody
H4K8ac (Millipore, 07-328, lot 2075956)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
68903251
Reads aligned (%)
87.2
Duplicates removed (%)
3.2
Number of peaks
37765 (qval < 1E-05)

hg19

Number of total reads
68903251
Reads aligned (%)
86.9
Duplicates removed (%)
3.7
Number of peaks
37695 (qval < 1E-05)

Base call quality data from DBCLS SRA