Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Breast

Cell type

AU565

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

AU565 cells, H3K4me1 ChIP

cell line

AU565

cell type

Breast cancer cell line

treatment

Control

chip antibody

H3K4me1 (Abcam, ab8895)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

56376297

Reads aligned (%)

96.6

Duplicates removed (%)

3.4

Number of peaks

60232 (qval < 1E-05)

hg19

Number of total reads

56376297

Reads aligned (%)

96.4

Duplicates removed (%)

3.6

Number of peaks

59745 (qval < 1E-05)