Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryonic fibroblast
Cell type
3T3-L1
Tissue
Embryo
Cell Type
Fibroblast

Attributes by original data submitter

Sample

source_name
3T3-L1_Mut_+Dox_Input
cell line
3T3-L1
cell type
Mouse preadipocytes
genotype/variation
expressing doxycycline inducible C/EBP beta PARylation site mutant
treated with
Doxycycline
ChIP
none (input)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
10263498
Reads aligned (%)
74.1
Duplicates removed (%)
5.0
Number of peaks
88 (qval < 1E-05)

mm9

Number of total reads
10263498
Reads aligned (%)
74.0
Duplicates removed (%)
5.9
Number of peaks
85 (qval < 1E-05)

Base call quality data from DBCLS SRA