Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
cell type
CD4+ T cells
chip antibody
PolIISer5 [Abcam, Cat no. ab5131, Lot no. 949433]
treatment
JQ1 treated

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
123073107
Reads aligned (%)
94.7
Duplicates removed (%)
38.8
Number of peaks
17506 (qval < 1E-05)

hg19

Number of total reads
123073107
Reads aligned (%)
93.8
Duplicates removed (%)
40.8
Number of peaks
17093 (qval < 1E-05)

Base call quality data from DBCLS SRA