SRX198039
GSM1022949: PolIISer5 untreated Tcell ChIPseq pooled5donor; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
cell type
CD4+ T cells
chip antibody
PolIISer5 [Abcam, Cat no. ab5131, Lot no. 949433]
treatment
untreated

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
98928188
Reads aligned (%)
95.0
Duplicates removed (%)
34.7
Number of peaks
15841 (qval < 1E-05)

hg19

Number of total reads
98928188
Reads aligned (%)
94.0
Duplicates removed (%)
37.0
Number of peaks
15454 (qval < 1E-05)

Base call quality data from DBCLS SRA