SRX197576
GSM1022904: Whole cell extract from post-MBT embryos (replicate 1); Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
2-4h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Staged embryos
Stage
post-MBT 02to04h AEL
genotype
Oregon-R
ChIP
None

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
13679068
Reads aligned (%)
97.8
Duplicates removed (%)
9.9
Number of peaks
1588 (qval < 1E-05)

dm3

Number of total reads
13679068
Reads aligned (%)
98.0
Duplicates removed (%)
6.4
Number of peaks
1787 (qval < 1E-05)

Base call quality data from DBCLS SRA