Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Embryo
Cell type
2-3h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Staged embryos
Stage
MBT 02to03h AEL
genotype
Oregon-R
ChIP
Pol II
antibody vendor/catalog
Covance 8WG16 (MMS-126R)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

dm6

Number of total reads
37678041
Reads aligned (%)
81.7
Duplicates removed (%)
43.4
Number of peaks
8442 (qval < 1E-05)

dm3

Number of total reads
37678041
Reads aligned (%)
82.2
Duplicates removed (%)
40.2
Number of peaks
8712 (qval < 1E-05)

Base call quality data from DBCLS SRA