SRX197565
GSM1022893: ChIP-seq H3K4me3 in MBT embryos (replicate 1); Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
2-3h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Staged embryos
Stage
MBT 02to03h AEL
genotype
Oregon-R
ChIP
H3K4me3
antibody vendor/catalog
Cell Signaling Technology 9751S

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
22974730
Reads aligned (%)
66.1
Duplicates removed (%)
27.2
Number of peaks
7640 (qval < 1E-05)

dm3

Number of total reads
22974730
Reads aligned (%)
66.5
Duplicates removed (%)
25.5
Number of peaks
7099 (qval < 1E-05)

Base call quality data from DBCLS SRA