SRX197561
GSM1022889: ChIP-seq H3K27me3 in 6-8h embryos (replicate 1); Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
6-8h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Staged embryos
Stage
06to08h AEL
genotype
Oregon-R
ChIP
H3K27me3
antibody vendor/catalog
Active Motif 39155

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
51341121
Reads aligned (%)
66.0
Duplicates removed (%)
50.5
Number of peaks
1818 (qval < 1E-05)

dm3

Number of total reads
51341121
Reads aligned (%)
66.1
Duplicates removed (%)
50.0
Number of peaks
2094 (qval < 1E-05)

Base call quality data from DBCLS SRA