Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
human primary monocytes isolated from PBMC of healthy donors
tissue
peripheral blood
cell type
monocytes

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP assay DNA libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
105604003
Reads aligned (%)
97.1
Duplicates removed (%)
24.0
Number of peaks
11560 (qval < 1E-05)

hg19

Number of total reads
105604003
Reads aligned (%)
96.1
Duplicates removed (%)
25.6
Number of peaks
11282 (qval < 1E-05)

Base call quality data from DBCLS SRA