Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
s2-cells-galnaz
biomaterial_provider
ATCC [D. Mel. (2), SL2] (ATCC® CRL-1963™)
tissue
Schneider's Drosophila Line 2 (SL2) cells
cell line
SL2
passages
10 to 12
chip antibody/selection
GalNAz feeding, Staudinger ligation, and streptavidin purification

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
10626680
Reads aligned (%)
84.9
Duplicates removed (%)
10.6
Number of peaks
2067 (qval < 1E-05)

dm3

Number of total reads
10626680
Reads aligned (%)
85.4
Duplicates removed (%)
9.9
Number of peaks
2352 (qval < 1E-05)

Base call quality data from DBCLS SRA