SRX195323
GSM1019777: IgG ChIPSeq(Hi); Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
IgG_ChIPSeq
cell line
E14Tg2A
cell type
embryonic stem cells
genotype/variation
wild type
antibody
IgG; Abcam, #46540

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
46935759
Reads aligned (%)
92.8
Duplicates removed (%)
75.0
Number of peaks
674 (qval < 1E-05)

mm9

Number of total reads
46935759
Reads aligned (%)
92.7
Duplicates removed (%)
75.1
Number of peaks
687 (qval < 1E-05)

Base call quality data from DBCLS SRA