Antigen

Antigen Class

TFs and others

Antigen

RXRA

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

RXRA_ChIP

cell line

MCF7

library id

JC907

antibody

RXRA; sc-553 (santa cruz)-Lot(E0411)

treatment

MCF7 cells in Complete DMEM media

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

34975568

Reads aligned (%)

83.3

Duplicates removed (%)

8.3

Number of peaks

1788 (qval < 1E-05)

hg19

Number of total reads

34975568

Reads aligned (%)

81.7

Duplicates removed (%)

12.1

Number of peaks

1776 (qval < 1E-05)