Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR2F2

Cell type

Cell type Class
Breast
Cell type
MCF-7
Primary Tissue
Breast
Site of Extraction
Pleura
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
COT2_ChIP
cell line
MCF7
library id
JC830
antibody
COT2; R&D systems PP-H7147-00-Lot(A2)
treatment
MCF7 cells in Complete DMEM media

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
19605686
Reads aligned (%)
78.5
Duplicates removed (%)
17.6
Number of peaks
33317 (qval < 1E-05)

hg38

Number of total reads
19605686
Reads aligned (%)
79.3
Duplicates removed (%)
17.2
Number of peaks
33404 (qval < 1E-05)

Base call quality data from DBCLS SRA