Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Kidney
Cell type
Kidney
MeSH Description
Body organ that filters blood for the secretion of URINE and that regulates ion concentrations.

Attributes by original data submitter

Sample

source_name
Kidney, H3K27me3 and H3K4me1 ChIPs
strain/background
C57BL/6
tissue
Kidney
age
Adult
chip antibody1
H3K27me3 (Millipore 07-449)
chip antibody2
H3K4me1 (Abcam ab8895)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
21278730
Reads aligned (%)
96.3
Duplicates removed (%)
49.7
Number of peaks
1174 (qval < 1E-05)

mm9

Number of total reads
21278730
Reads aligned (%)
96.1
Duplicates removed (%)
49.8
Number of peaks
1173 (qval < 1E-05)

Base call quality data from DBCLS SRA