Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Lpt

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
Schneider's Drosophila Line 2; S2 cells
cell type
S2
genotype/variation
Trr knock-down
chip antibody
(rb) α-LPT (#470, Ali Shilatifard)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
12587682
Reads aligned (%)
50.9
Duplicates removed (%)
43.8
Number of peaks
8072 (qval < 1E-05)

dm6

Number of total reads
12587682
Reads aligned (%)
47.8
Duplicates removed (%)
47.0
Number of peaks
7319 (qval < 1E-05)

Base call quality data from DBCLS SRA