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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: BRD3
wikigenes
PDBj
CellType: Mutu
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX1923324
GSM2229486: ChIP-seq BRD3 Mutu Replicate1; Homo sapiens; Human gammaherpesvirus 4; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
BRD3
Cell type
Cell type Class
Blood
Cell type
Mutu
NA
NA
Attributes by original data submitter
Sample
source_name
MutuI (EBV+ Burkitt lymphoma cell line)
cell line
MutuI
pathogen
Epstein-Barr virus
chip antibody
BRD3
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was prepared and ChIP performed as described in the paper ChIP-seq libraries were prepared as described in the paper
Sequencing Platform
instrument_model
Illumina HiSeq 4000
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
37797896
Reads aligned (%)
68.5
Duplicates removed (%)
27.2
Number of peaks
1416 (qval < 1E-05)
hg38
Number of total reads
37797896
Reads aligned (%)
70.7
Duplicates removed (%)
25.9
Number of peaks
1066 (qval < 1E-05)
Base call quality data from
DBCLS SRA