Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
whole liver extract
age
29-32 days
chip antibody
INPUT
treament
phenobarbital
tissue
liver
animal id
2021
experiment id
A
strain
B6C3F1/Crl (C57BL/6 male x C3H/He female)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
70501656
Reads aligned (%)
98.0
Duplicates removed (%)
11.2
Number of peaks
456 (qval < 1E-05)

mm9

Number of total reads
70501656
Reads aligned (%)
97.8
Duplicates removed (%)
11.2
Number of peaks
537 (qval < 1E-05)

Base call quality data from DBCLS SRA