Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Placenta
Cell type
Trophoblast stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
TS cells_Input M
strain
CD1(ICR)
developmental stage
blastocysts
cell type
trophoblast stem (TS) cells
cell cycle stage
M
molecule subtype
Input DNA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
18306874
Reads aligned (%)
82.3
Duplicates removed (%)
10.4
Number of peaks
143 (qval < 1E-05)

mm9

Number of total reads
18306874
Reads aligned (%)
82.2
Duplicates removed (%)
10.4
Number of peaks
118 (qval < 1E-05)

Base call quality data from DBCLS SRA