Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cp190

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
chip antibody
CP190 antibody (rabbit)
cell line
S2 DRSC: Schneider's line 2
treatment
control

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
29943013
Reads aligned (%)
91.6
Duplicates removed (%)
68.3
Number of peaks
16140 (qval < 1E-05)

dm6

Number of total reads
29943013
Reads aligned (%)
91.3
Duplicates removed (%)
70.2
Number of peaks
13635 (qval < 1E-05)

Base call quality data from DBCLS SRA