Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Th9
NA
NA

Attributes by original data submitter

Sample

source_name
Th9 cells
strain/background
C57BL/6
tissue
spleen
cell type
Th9
chip antibody
Rabbit IgG (R&D Systems)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
21468616
Reads aligned (%)
95.0
Duplicates removed (%)
82.7
Number of peaks
187 (qval < 1E-05)

mm9

Number of total reads
21468616
Reads aligned (%)
94.8
Duplicates removed (%)
82.9
Number of peaks
164 (qval < 1E-05)

Base call quality data from DBCLS SRA