Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SUMO1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa Cells
affinity tag in derived hela cells
none
chip antibody
SUMO-1
growth phase
S0
cell line
HeLa Cells

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
64345987
Reads aligned (%)
46.0
Duplicates removed (%)
39.8
Number of peaks
6538 (qval < 1E-05)

hg38

Number of total reads
64345987
Reads aligned (%)
47.9
Duplicates removed (%)
38.0
Number of peaks
6497 (qval < 1E-05)

Base call quality data from DBCLS SRA