Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa Cells
affinity tag in derived hela cells
His6-biotin-tagged SUMO-1
chip antibody
none
growth phase
S6
cell line
HeLa Cells

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
43089017
Reads aligned (%)
77.0
Duplicates removed (%)
33.0
Number of peaks
12345 (qval < 1E-05)

hg19

Number of total reads
43089017
Reads aligned (%)
75.5
Duplicates removed (%)
33.7
Number of peaks
11867 (qval < 1E-05)

Base call quality data from DBCLS SRA