ChIP-Atlas: SRX190336

Antigen

GEO Accession: GSM1010880
antibody antibodydescription: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of NF-1 of human origin. Antibody Target: NFIC
antibody targetdescription: Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.
antibody vendorid: sc-81335
antibody vendorname: Santa Cruz Biotechnology
antibody: NFIC_(SC-81335)
cell description: neuroblastoma, newly promoted to tier 2: not in 2011 analysis, the SK-N-SH line was established from a neuroblastoma in a 4 year old individual.
cell karyotype: cancer
cell lineage: ectoderm
cell organism: human
cell sex: F
cell: SK-N-SH
controlid: SL12791,SL13505
datatype description: Chromatin IP Sequencing
datatype: ChipSeq
lab description: Myers - Hudson Alpha Institute for Biotechnology
lab: HudsonAlpha
labexpid: SL14603,SL13313
protocol description: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)
protocol: v042211.1
replicate: 1,2
softwareversion: MACS
treatment description: No special treatment or protocol applies
treatment: None

library_name: GSM1010880: HudsonAlpha_ChipSeq_SK-N-SH_NFIC_(SC-81335)_v042211.1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP
library_construction_protocol: Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs