ChIP-Atlas: SRX190288

Antigen

GEO Accession: GSM1010832
antibody antibodydescription: Kaiso (6F8) Mouse monoclonal IgG1. Raised against amino acids 1-504 representing full length Kaiso of human origin. Recommended for detection of Kaiso of m, r, h, canine and chicken origin by WB, IP, IF and ELISA. Antibody Target: ZBTB33
antibody targetdescription: KAISO is a transcriptional regulator that binds, via its zinc fingers, to DNA sequences containing methylated CGCG or to the consensus KAISO-binding site (KBS) TCCTGCNA
antibody vendorid: sc-23871
antibody vendorname: Santa Cruz Biotechnology
antibody: ZBTB33
cell description: epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), "This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male." - ATCC, newly promoted to tier 2: not in 2011 analysis
cell karyotype: cancer
cell lineage: endoderm
cell organism: human
cell sex: M
cell: A549
controlid: SL6021
datatype description: Chromatin IP Sequencing
datatype: ChipSeq
lab description: Myers - Hudson Alpha Institute for Biotechnology
lab: HudsonAlpha
labexpid: SL6016,SL6592
protocol description: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)
protocol: v042211.1
replicate: 1,2
softwareversion: MACS
treatment description: 1 h with 0.02% Ethanol (Myers)
treatment: EtOH_0.02pct

library_name: GSM1010832: HudsonAlpha_ChipSeq_A549_ZBTB33_EtOH_0.02pct_v042211.1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP
library_construction_protocol: Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs