ChIP-Atlas: SRX190255

Antigen

GEO Accession: GSM1010799
antibody antibodydescription: Kaiso (6F8) Mouse monoclonal IgG1. Raised against amino acids 1-504 representing full length Kaiso of human origin. Recommended for detection of Kaiso of m, r, h, canine and chicken origin by WB, IP, IF and ELISA. Antibody Target: ZBTB33
antibody targetdescription: KAISO is a transcriptional regulator that binds, via its zinc fingers, to DNA sequences containing methylated CGCG or to the consensus KAISO-binding site (KBS) TCCTGCNA
antibody vendorid: sc-23871
antibody vendorname: Santa Cruz Biotechnology
antibody: ZBTB33
cell description: neuroblastoma, newly promoted to tier 2: not in 2011 analysis, the SK-N-SH line was established from a neuroblastoma in a 4 year old individual.
cell karyotype: cancer
cell lineage: ectoderm
cell organism: human
cell sex: F
cell: SK-N-SH
controlid: SL13505
datatype description: Chromatin IP Sequencing
datatype: ChipSeq
lab description: Myers - Hudson Alpha Institute for Biotechnology
lab: HudsonAlpha
labexpid: SL13502,SL14711
protocol description: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)
protocol: v042211.1
replicate: 1,2
softwareversion: MACS
treatment description: No special treatment or protocol applies
treatment: None

library_name: GSM1010799: HudsonAlpha_ChipSeq_SK-N-SH_ZBTB33_v042211.1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP
library_construction_protocol: Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs