Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H9
NA
NA

Attributes by original data submitter

Sample

source_name
H9 hESC
cell type
RA-mediated differentiating hESC
chip antibody
p53
antibody vendor
Santa Cruz Biotechnology

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
14655106
Reads aligned (%)
48.9
Duplicates removed (%)
50.8
Number of peaks
1277 (qval < 1E-05)

hg38

Number of total reads
14655106
Reads aligned (%)
49.4
Duplicates removed (%)
50.3
Number of peaks
1299 (qval < 1E-05)

Base call quality data from DBCLS SRA