SRX189239
GSM1008619: cMyc ChIPSeq in H128 rep2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Lung
Cell type
NCI-H128
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Small Cell

Attributes by original data submitter

Sample

source_name
Small Cell Lung Carcinoma
chip antibody
cMyc
cell line
H128

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
39448773
Reads aligned (%)
79.5
Duplicates removed (%)
32.5
Number of peaks
823 (qval < 1E-05)

hg19

Number of total reads
39448773
Reads aligned (%)
78.7
Duplicates removed (%)
33.9
Number of peaks
1039 (qval < 1E-05)

Base call quality data from DBCLS SRA