Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MAX

Cell type

Cell type Class
Lung
Cell type
NCI-H128
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Small Cell

Attributes by original data submitter

Sample

source_name
Small Cell Lung Carcinoma
chip antibody
Max
cell line
H128

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
55194619
Reads aligned (%)
77.6
Duplicates removed (%)
4.5
Number of peaks
37593 (qval < 1E-05)

hg38

Number of total reads
55194619
Reads aligned (%)
79.0
Duplicates removed (%)
3.5
Number of peaks
37222 (qval < 1E-05)

Base call quality data from DBCLS SRA