SRX189237
GSM1008617: Max ChIPSeq H2171 rep2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MAX

Cell type

Cell type Class
Lung
Cell type
NCI-H2171
Primary Tissue
Lung
Site of Extraction
Effusion, Pleural
Tissue Diagnosis
Carcinoma Small Cell

Attributes by original data submitter

Sample

source_name
Small Cell Lung Carcinoma
chip antibody
Max
cell line
H2171

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
46375954
Reads aligned (%)
86.8
Duplicates removed (%)
8.4
Number of peaks
75438 (qval < 1E-05)

hg38

Number of total reads
46375954
Reads aligned (%)
87.7
Duplicates removed (%)
8.0
Number of peaks
75619 (qval < 1E-05)

Base call quality data from DBCLS SRA